Structure of PDB 5wlc Chain NE

Receptor sequence
>5wlcNE (length=158) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence]
AAAAAAAAAAAAAAAAAAAAAAAAAAADQVIGKARSRTLEMRLNRLSRVN
GHQDKINKLEKVPMHIRRGMIDKHVKRIKKYEQEAAEGGIVLSKVKKGQF
RKIESTYKKDIERRIGGSIKARDKEKATKRERGLKISSVGRSTRNGLIVS
KRDIARIS
3D structure
PDB5wlc The complete structure of the small-subunit processome.
ChainNE
Resolution3.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna NE K233 V234 P235 I238 G241 M242 K245 K252 K280 K281 R285 R286 K61 V62 P63 I66 G69 M70 K73 K80 K108 K109 R113 R114
BS02 rna NE M236 R239 I291 K292 A293 M64 R67 I119 K120 A121
BS03 rna NE H224 M236 H52 M64
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5wlc, PDBe:5wlc, PDBj:5wlc
PDBsum5wlc
PubMed28945246
UniProtP40546|FAF1_YEAST Protein FAF1 (Gene Name=FAF1)

[Back to BioLiP]