Structure of PDB 6b4v Chain NB

Receptor sequence
>6b4vNB (length=146) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEAR
IRAQAKRLAERKAEAERLKEILENLTLTIPVRAGETKIYGSVTAKDIAEA
LSRQHGITIDPKRLALEKPIKELGEYVLTYKPHPEVPIQLKVSVVA
3D structure
PDB6b4v Mechanism of Inhibition of Translation Termination by Blasticidin S.
ChainNB
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna NB K22 P23 G24 Y25 R27 N28 Y29 R33 R57 K22 P23 G24 Y25 R27 N28 Y29 R33 R57
BS02 MG NB G90 S91 P119 G90 S91 P119
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6b4v, PDBe:6b4v, PDBj:6b4v
PDBsum6b4v
PubMed29366636
UniProtQ72GV5|RL9_THET2 Large ribosomal subunit protein bL9 (Gene Name=rplI)

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