Structure of PDB 7qiz Chain NA

Receptor sequence

>7qizNA (length=213) Species: 4081 (Solanum lycopersicum) [Search protein sequence]

QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRAT
RTQNVLGDKGRRIRELTSVVQKRFNFDENTVELYAEKVNNRGLCAIAQAE
SLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK
DGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTP
LPDLVTIHPPKEE

3D structure

PDB

7qiz Specific features and methylation sites of a plant ribosome

Chain

Resolution

2.38 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	NA	Q7 M8 S9 K10 K11 R12 R30 S142 G143 K144 R146 Q148 R149 A150 K154 Y159 M160 I161 S162 S163 G164 Q165 H177 R181 V184 K188 P208 D209	Q1 M2 S3 K4 K5 R6 R24 S136 G137 K138 R140 Q142 R143 A144 K148 Y153 M154 I155 S156 S157 G158 Q159 H171 R175 V178 K182 P202 D203
BS02	BGC	NA	R54 C100 I102 D172	R48 C94 I96 D166

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005634	nucleus
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022626	cytosolic ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:7qiz, PDBe:7qiz, PDBj:7qiz
PDBsum	7qiz
PubMed	35643637
UniProt	A0A3Q7HBR5

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