Structure of PDB 4u6f Chain N9

Receptor sequence

>4u6fN9 (length=58) Species: 559292 (Saccharomyces cerevisiae S288C)

AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKHALHGTA
KALAAAKK

3D structure

• PDB: 4u6f ?
• Chain: N9
• Resolution: 3.1 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	N9	K3 K5 N6 H7 T8 A9 H10 N11 Q12 T13 R14 K15 H17 R18 N19 K23 K25 T26 Y27 K28 Y29 L32 K33 D36 P37 K38 F39 R40 R41 N42 H43 K44 H45 A46 L47 G49 T50	K2 K4 N5 H6 T7 A8 H9 N10 Q11 T12 R13 K14 H16 R17 N18 K22 K24 T25 Y26 K27 Y28 L31 K32 D35 P36 K37 F38 R39 R40 N41 H42 K43 H44 A45 L46 G48 T49
BS02	OHX	N9	H17 R18	H16 R17

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0002181 cytoplasmic translation
• GO:0006412 translation

Cellular Component

• GO:0005737 cytoplasm
• GO:0005829 cytosol
• GO:0005840 ribosome
• GO:0022625 cytosolic large ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:4u6f, PDBe:4u6f, PDBj:4u6f
• PDBsum: 4u6f
• PubMed: 25209664
• UniProt: P05747|RL29_YEAST Large ribosomal subunit protein eL29 (Gene Name=RPL29)