Structure of PDB 8ys2 Chain N

Receptor sequence
>8ys2N (length=79) Species: 9606 (Homo sapiens) [Search protein sequence]
KCEPSQFQCTNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNN
GQCVPSRWKCDGDPDCEDGSDESPEQCHM
3D structure
PDB8ys2 The receptor VLDLR binds Eastern Equine Encephalitis virus through multiple distinct modes.
ChainN
Resolution5.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA N W50 C52 D53 D55 D57 D63 E64 W19 C21 D22 D24 D26 D32 E33
BS02 CA N W89 D92 D94 D96 D102 E103 W58 D61 D63 D65 D71 E72
External links
PDB RCSB:8ys2, PDBe:8ys2, PDBj:8ys2
PDBsum8ys2
PubMed39127734
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

[Back to BioLiP]