Structure of PDB 8xjv Chain N

Receptor sequence
>8xjvN (length=105) Species: 8355 (Xenopus laevis) [Search protein sequence]
TQKKDGKKRRKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVF
ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK
YTSAK
3D structure
PDB8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
ChainN
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna N G128 K129 R131 K133 R135 G6 K7 R9 K11 R13
BS02 dna N Q124 K125 K130 R131 R132 R188 Q2 K3 K8 R9 R10 R66
External links
PDB RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
PDBsum8xjv
PubMed39103524
UniProtP02281|H2B11_XENLA Histone H2B 1.1

[Back to BioLiP]