Structure of PDB 8e47 Chain N

Receptor sequence

>8e47N (length=209) Species: 562 (Escherichia coli) [Search protein sequence]

MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQV
TTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVEL
FADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQ
TPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSD
LIVKPAVKA

3D structure

PDB

8e47 SLC collection of antibiotic analogs

Chain

Resolution

2.32 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	N	M11 Y45 K56 R59 T61 P63 H67 E81 K114 G115 G117 F118 G120 R124 F127 T129 T133 H134 G135 S137 L138 S139 H140 R141 S145 I146 G147 Q148 N149 Q150 T151 K154 V155 K159 M161 Q164 R169 Q173 S174 A192 V193 T197 K208	M11 Y45 K56 R59 T61 P63 H67 E81 K114 G115 G117 F118 G120 R124 F127 T129 T133 H134 G135 S137 L138 S139 H140 R141 S145 I146 G147 Q148 N149 Q150 T151 K154 V155 K159 M161 Q164 R169 Q173 S174 A192 V193 T197 K208

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0019843	rRNA binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8e47, PDBe:8e47, PDBj:8e47
PDBsum	8e47
PubMed
UniProt	P60438\|RL3_ECOLI Large ribosomal subunit protein uL3 (Gene Name=rplC)

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