Structure of PDB 8bpx Chain N

Receptor sequence
>8bpxN (length=488) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
MFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLASNVGWLGLLS
VLITLLLLAAGAPLLTIAHLFWNNLFRRDNFTYFCQIFLLLSTAGTISMC
FDFFDQERFDAFEFIVLILLSTCGMLFMISAYDLIAMYLAIELQSLCFYV
IAASKRKSEFSTEAGLKYLILGAFSSGILLFGCSMIYGSTGATHFDQLAK
ILTGYEITGARSSGIFMGILFIAVGFLFKITAVPFHMWAPDIYEGSPTPV
TAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIASMILGALAAMA
QTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFA
IVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKF
YLFFAALGCGAYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPM
DRNKSLLLAMTSFFITLFLLYPSPLFSVTHQMALSLYL
3D structure
PDB8bpx Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
ChainN
Resolution2.09 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 7.1.1.2: NADH:ubiquinone reductase (H(+)-translocating).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UQ5 N V244 P245 M248 F296 A300 V233 P234 M237 F285 A289
BS02 Q7G N F407 C408 F411 L480 L481 F396 C397 F400 L469 L470
Gene Ontology
Molecular Function
GO:0008137 NADH dehydrogenase (ubiquinone) activity
Biological Process
GO:0042773 ATP synthesis coupled electron transport
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0009536 plastid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8bpx, PDBe:8bpx, PDBj:8bpx
PDBsum8bpx
PubMed36585502
UniProtO05000|NU2M_ARATH NADH-ubiquinone oxidoreductase chain 2 (Gene Name=ND2)

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