Structure of PDB 7vpd Chain N

Receptor sequence
>7vpdN (length=131) Species: 100226 (Streptomyces coelicolor A3(2)) [Search protein sequence]
PPVKGRATRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTL
QSLADAGEVDVLRTAEGESVYRRCSTGDHHHHLVCRACGKAVEVEGPAVE
KWAEAIAAEHGYVNVAHTVEIFGTCADCAGA
3D structure
PDB7vpd Structural basis of Streptomyces transcription activation by zinc uptake regulator.
ChainN
Resolution3.77 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna N Q15 R16 T49 T50 Q10 R11 T44 T45
BS02 dna N R11 Y52 E73 R6 Y47 E68
BS03 ZN N D65 C79 H85 H87 D60 C74 H80 H82
BS04 ZN N H84 H86 E105 H122 H79 H81 E100 H117
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0001217 DNA-binding transcription repressor activity
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045892 negative regulation of DNA-templated transcription
GO:1900376 regulation of secondary metabolite biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0032993 protein-DNA complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7vpd, PDBe:7vpd, PDBj:7vpd
PDBsum7vpd
PubMed35871291
UniProtQ9L2H5

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