Structure of PDB 6v7b Chain N

Receptor sequence
>6v7bN (length=119) Species: 1805492 (Pyrobaculum filamentous virus 1) [Search protein sequence]
IAETLTEKHTLGIEKVVATDSWRVGITSREKKLERINISAEISRRIQDEA
IAYARNKGIPYLPGINGIAWKLLRLKWLGYTDQINVVMRTVPAEWRDFLT
QIMENTQMESMYSELRKVR
3D structure
PDB6v7b Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
ChainN
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna N K24 W31 R38 S52 R53 P72 R83 K15 W22 R29 S43 R44 P63 R74
BS02 dna N L14 K17 H18 G21 V25 W31 I35 K41 R44 S48 G76 W79 K80 L5 K8 H9 G12 V16 W22 I26 K32 R35 S39 G67 W70 K71
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6v7b, PDBe:6v7b, PDBj:6v7b
PDBsum6v7b
PubMed32368353
UniProtA0A140F3K6|CAPS1_PFV1 Major capsid protein 1

[Back to BioLiP]