Structure of PDB 6cg0 Chain N
Receptor sequence
>6cg0N (length=75) Species:
9606
(Homo sapiens) [
Search protein sequence
]
SYAFFVQTCREEHKKKSVNFSEFSKKCSERWKKRPPSAFFLFCSEYRPKI
KGEHPGLSIGDVAKKLGEMWNNTAA
3D structure
PDB
6cg0
Cracking the DNA Code for V(D)J Recombination.
Chain
N
Resolution
3.17 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
N
A17 Q21 S35 V36 F38 N134
A3 Q7 S17 V18 F20 N71
BS02
dna
N
Y16 F38 S42 S46 W49 K96 F103 R110 I122
Y2 F20 S24 S28 W31 K33 F40 R47 I59
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:6cg0
,
PDBe:6cg0
,
PDBj:6cg0
PDBsum
6cg0
PubMed
29628308
UniProt
P09429
|HMGB1_HUMAN High mobility group protein B1 (Gene Name=HMGB1)
[
Back to BioLiP
]