Structure of PDB 1ibk Chain N
Receptor sequence
>1ibkN (length=60) Species:
274
(Thermus thermophilus) [
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ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKG
QLPGVRKASW
3D structure
PDB
1ibk
Recognition of cognate transfer RNA by the 30S ribosomal subunit.
Chain
N
Resolution
3.31 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
N
A2 R3 K4 A5 L6 F16 V18 R19 Y21 T22 C27 R29 R31 V33 Y34 R35 R41 I42 R45 E46 K58 S60 W61
A1 R2 K3 A4 L5 F15 V17 R18 Y20 T21 C26 R28 R30 V32 Y33 R34 R40 I41 R44 E45 K57 S59 W60
BS02
ZN
N
C24 C27 C40 C43
C23 C26 C39 C42
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0008270
zinc ion binding
GO:0019843
rRNA binding
GO:0046872
metal ion binding
Biological Process
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0015935
small ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1ibk
,
PDBe:1ibk
,
PDBj:1ibk
PDBsum
1ibk
PubMed
11340196
UniProt
P0DOY6
|RS14Z_THET8 Small ribosomal subunit protein uS14 (Gene Name=rpsZ)
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