Structure of PDB 8b2l Chain M1
Receptor sequence
>8b2lM1 (length=52) Species:
4097
(Nicotiana tabacum) [
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GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTARGPN
SS
3D structure
PDB
8b2l
Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Chain
M1
Resolution
2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
M1
H5 R10 A11 K13 V14 R15 T18 V21 K23 Q24 D25 K26 K27 K28 P30 R31 R33 A34 R37 N41 R42 T46 P57 N58 S60
H4 R9 A10 K12 V13 R14 T17 V20 K22 Q23 D24 K25 K26 K27 P29 R30 R32 A33 R36 N40 R41 T45 P49 N50 S52
BS02
rna
M1
G2 K3 H5
G1 K2 H4
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005829
cytosol
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8b2l
,
PDBe:8b2l
,
PDBj:8b2l
PDBsum
8b2l
PubMed
37156858
UniProt
A0A1S3XGJ0
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