Structure of PDB 8w51 Chain M

Receptor sequence

>8w51M (length=144) Species: 562 (Escherichia coli) [Search protein sequence]

MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGF
EGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANI
IGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE

3D structure

PDB

8w51 Structure basis of translation regulation by YchF bound to ribosome

Chain

Resolution

2.4 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	M	L3 N4 P8 E10 G11 S12 K13 K14 A15 G16 K17 R18 L19 G20 R21 G22 I23 G24 S25 K29 T30 G31 G32 R33 G34 H35 K36 G37 Q38 K39 S40 R41 S42 G43 R47 F50 E51 G52 G53 Q54 M55 Y58 R59 R60 L61 P62 K63 F64 G65 F66 S68 R69 K70 A71 E76 R78 N99 Q104 K109 I111 L112 R126 T128 K129 G130	L3 N4 P8 E10 G11 S12 K13 K14 A15 G16 K17 R18 L19 G20 R21 G22 I23 G24 S25 K29 T30 G31 G32 R33 G34 H35 K36 G37 Q38 K39 S40 R41 S42 G43 R47 F50 E51 G52 G53 Q54 M55 Y58 R59 R60 L61 P62 K63 F64 G65 F66 S68 R69 K70 A71 E76 R78 N99 Q104 K109 I111 L112 R126 T128 K129 G130

External links

PDB	RCSB:8w51, PDBe:8w51, PDBj:8w51
PDBsum	8w51
PubMed
UniProt	P02413\|RL15_ECOLI Large ribosomal subunit protein uL15 (Gene Name=rplO)