Structure of PDB 8t5h Chain M

Receptor sequence

>8t5hM (length=136) Species: 562 (Escherichia coli) [Search protein sequence]

MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAAR
RAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGK
VLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM

3D structure

PDB

8t5h How Dedicated Ribosomes Translate a Leaderless mRNA.

Chain

Resolution

3.3 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	M	P4 K5 R6 F9 R10 K11 M12 H13 K14 G15 R16 R18 Q22 G23 R44 Q45 A48 R51 R55 K62 W64 F68 D70 K76 L78 R81 M82 G83 K84 G85 K86 K100 L119 A122 K123 P125 K127	P4 K5 R6 F9 R10 K11 M12 H13 K14 G15 R16 R18 Q22 G23 R44 Q45 A48 R51 R55 K62 W64 F68 D70 K76 L78 R81 M82 G83 K84 G85 K86 K100 L119 A122 K123 P125 K127
BS02	rna	M	R6 P77 N88	R6 P77 N88

External links

PDB	RCSB:8t5h, PDBe:8t5h, PDBj:8t5h
PDBsum	8t5h
PubMed	38185325
UniProt	P0ADY7\|RL16_ECOLI Large ribosomal subunit protein uL16 (Gene Name=rplP)