Structure of PDB 8qrn Chain M

Receptor sequence
>8qrnM (length=119) Species: 9606 (Homo sapiens) [Search protein sequence]
KAYRGGHLTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPN
SHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFPLHPMMITNAER
LRRKRAREVLLASQKTDAE
3D structure
PDB8qrn GTPBP8 plays a role in mitoribosome formation in human mitochondria.
ChainM
Resolution2.98 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna M K10 A11 R13 H16 L21 T27 N28 Y32 H38 N39 K40 R43 R46 F47 C79 G80 H82 S84 P86 R109 K1 A2 R4 H7 L12 T18 N19 Y23 H29 N30 K31 R34 R37 F38 C70 G71 H73 S75 P77 R100
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005829 cytosol
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8qrn, PDBe:8qrn, PDBj:8qrn
PDBsum8qrn
PubMed38969660
UniProtQ9Y3D3|RT16_HUMAN Small ribosomal subunit protein bS16m (Gene Name=MRPS16)

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