Structure of PDB 8ffr Chain M

Receptor sequence
>8ffrM (length=420) Species: 11294 (Rabies virus CVS-11) [Search protein sequence]
DKIVFKVNNQVVSLKPEIIVDQHEYKYPAIKDLKKPCITLGKAPDLNKAY
KSVLSGMSAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIVIARKGDKI
TPGSLVEIKRTDVEGNWALTGGMELTRDPTVPEHASLVGLLLSLYRLSKI
SGQNTGNYKTNIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNF
RFLAGTYDMFFSRIEHLYSAIRVGTVVTAYEDCSGLVSFTGFIKQINLTA
REAILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSN
AVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKG
TFERRFFRDEKELQEYEAAETRSPEAVYTRIMMNGGRLKRSHIRRYVSVS
SNHQARPNSFAEFLNKTYSS
3D structure
PDB8ffr Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
ChainM
Resolution3.49 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna M R149 Q156 N157 T158 Y161 R168 I172 A223 R225 V226 V229 V230 D235 S237 R290 K297 S302 R323 A327 T328 R434 R146 Q153 N154 T155 Y158 R165 I169 A220 R222 V223 V226 V227 D232 S234 R287 K294 S299 R320 A324 T325 R406
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8ffr, PDBe:8ffr, PDBj:8ffr
PDBsum8ffr
PubMed36560817
UniProtA8VR20

[Back to BioLiP]