Structure of PDB 8bdb Chain M

Receptor sequence
>8bdbM (length=479) Species: 42003 (Griffithsia monilis) [Search protein sequence]
SVEERTRIKNERYESGVIPYAKMGYWDPNYAVKDTDILALFRVSPQPGVD
PVEASAAVAGESSTATWTVVWTDLLTACDLYRAKAYKVESVPNTSDQYFA
YISYDIDLFEEGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQ
GPATGIVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDF
LKDDENINSQPFMRWKERFLYSIEAVNRSIAATGEVKGHYMNVTAATMEE
MYERAEFAKQLGTVIIMIDLVIGYTAIQTMGIWARKNDMILHLHRAGNST
YSRQKIHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIRGFYNTLL
LPYLEVNLPQGIFFQQDWASLRKVTPVASGGIHCGQMHQLLDYLGNDVVL
QFGGGTIGHPDGIQAGATANRVALESMVIARNEGRDYVAEGPQILRDAAK
TCGPLQTALDLWKDITFNYTSTDTADFVE
3D structure
PDB8bdb Grafting Rhodobacter sphaeroides with red algae Rubisco to accelerate catalysis and plant growth.
ChainM
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.1.39: ribulose-bisphosphate carboxylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG M K205 D207 E208 K202 D204 E205
BS02 CAP M T177 K179 K205 D207 E208 H297 R298 H330 K337 L338 S382 G383 G406 G407 T174 K176 K202 D204 E205 H294 R295 H327 K334 L335 S379 G380 G403 G404
BS03 BCT M T469 N471 T466 N468
BS04 BCT M F367 Q368 F364 Q365
BS05 BCT M P445 R449 P442 R446
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004497 monooxygenase activity
GO:0016829 lyase activity
GO:0016984 ribulose-bisphosphate carboxylase activity
GO:0046872 metal ion binding
Biological Process
GO:0015977 carbon fixation
GO:0015979 photosynthesis
GO:0019253 reductive pentose-phosphate cycle
Cellular Component
GO:0009507 chloroplast

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8bdb, PDBe:8bdb, PDBj:8bdb
PDBsum8bdb
PubMed37291398
UniProtA7UM67

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