Structure of PDB 8azw Chain M

Receptor sequence
>8azwM (length=134) Species: 4097 (Nicotiana tabacum) [Search protein sequence]
VKFLKPNKAVIILQGKYAGRKAVIIRAFDEGTRDRPYGHCLVAGISKYPK
KVIRKDSAKKQAKKSRVKTFIKLVNYNHIMPTRYTLDVDLKDVVNVDVLQ
SRDKKVTAAKEAKARLEERFKTGKNRWFFTKLRF
3D structure
PDB8azw Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
ChainM
Resolution2.14 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna M G16 K17 R36 Y38 K48 K51 I54 R55 K61 K64 K65 R67 K69 K73 L74 N76 H79 R103 K106 K111 K132 R134 F135 G15 K16 R35 Y37 K47 K50 I53 R54 K60 K63 K64 R66 K68 K72 L73 N75 H78 R102 K105 K110 K131 R133 F134
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8azw, PDBe:8azw, PDBj:8azw
PDBsum8azw
PubMed37156858
UniProtA0A1S4AEL0

[Back to BioLiP]