Structure of PDB 7syk Chain M

Receptor sequence

>7sykM (length=151) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

DIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIE
GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRF
EKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAAGTK
K

3D structure

PDB

7syk Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.

Chain

Resolution

4.2 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	M	E7 P14 Y36 N39 I40 L42 K58 K59 N65 S67 I68 R69 R71 K79 M82 Q83 T85 Y92 H94 R97 K98 Y99 K104 R105 H106 K107 N108 R132 P133 L134 S135 K136 T137 R139 F140 K153	E5 P12 Y34 N37 I38 L40 K56 K57 N63 S65 I66 R67 R69 K77 M80 Q81 T83 Y90 H92 R95 K96 Y97 K102 R103 H104 K105 N106 R130 P131 L132 S133 K134 T135 R137 F138 K151

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005634	nucleus
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022626	cytosolic ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Cellular Component

External links

PDB	RCSB:7syk, PDBe:7syk, PDBj:7syk
PDBsum	7syk
PubMed	35822879
UniProt	G1TRM4\|RS11_RABIT Small ribosomal subunit protein uS17 (Gene Name=RPS11)

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