Structure of PDB 6yaf Chain M

Receptor sequence
>6yafM (length=428) Species: 10116 (Rattus norvegicus) [Search protein sequence]
MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNI
ARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEEN
IKNNFVLIYELLDEILDFGYPQNSETGALKTFITQHQTKEEQSQITSQVT
GQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYL
SGMPECKFGMNDKIVIESMEQKLISEEDLGKQSIAIDDCTFHQCVRLSKF
DSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVI
KSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKR
MAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYLKVF
EPKLNYSDHDVIKWVRYIGRSGIYETRC
3D structure
PDB6yaf Architecture of the AP2/clathrin coat on the membranes of clathrin-coated vesicles.
ChainM
Resolution9.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide M F174 E238 P404 K431 W432 V433 R434 I436 F168 E220 P386 K413 W414 V415 R416 I418
Gene Ontology
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0030131 clathrin adaptor complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6yaf, PDBe:6yaf, PDBj:6yaf
PDBsum6yaf
PubMed32743075
UniProtP84092|AP2M1_RAT AP-2 complex subunit mu (Gene Name=Ap2m1)

[Back to BioLiP]