Structure of PDB 6wq2 Chain M

Receptor sequence
>6wq2M (length=154) Species: 176106 (Sulfolobus islandicus filamentous virus) [Search protein sequence]
RRNRRLSSASVYRYYLKRISMNIGTTGHVNGLSIAGNPEIMRAIARLSEQ
ETYNWVTDYAPSHLAKEVVKQISGKYNIPGAYQGLLMAFAEKVLANYILD
YKGEPLVEIHHNFLWELMQGFIYTFVRKDGKPVTVDMSKVLTEIEDALFK
LVKK
3D structure
PDB6wq2 Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.
ChainM
Resolution4.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna M R15 Y16 E53 N56 W57 D60 A90 E93 K94 R13 Y14 E51 N54 W55 D58 A88 E91 K92
BS02 dna M R6 L8 S12 R15 K19 R20 W57 Y61 K68 K104 R4 L6 S10 R13 K17 R18 W55 Y59 K66 K102
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6wq2, PDBe:6wq2, PDBj:6wq2
PDBsum6wq2
PubMed32759221
UniProtQ914J5|CAPS2_SIFVH Major capsid protein 2 (Gene Name=SIFV0035)

[Back to BioLiP]