Structure of PDB 6rwe Chain M

Receptor sequence
>6rweM (length=392) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGEN
ERLEYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKN
LRGPKIKSKSDTRPSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDS
AIDIVDSVRTASKDLPTRAQLDEITDRPTPLANIDATDVEQIYPIESIIP
KKELQFIRVSSILKEADKEKKLELFPYQNNSKYVAKKLDSLTQPSQMTKL
QLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILSRFTVIKPGQ
FGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSK
VVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPF
3D structure
PDB6rwe Molecular insight into RNA polymerase I promoter recognition and promoter melting.
ChainM
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna M P357 S358 P348 S349
BS02 dna M P385 K386 S387 P376 K377 S378
Gene Ontology
Molecular Function
GO:0001054 RNA polymerase I activity
GO:0003677 DNA binding
GO:0016779 nucleotidyltransferase activity
Biological Process
GO:0001188 RNA polymerase I preinitiation complex assembly
GO:0006351 DNA-templated transcription
GO:0006360 transcription by RNA polymerase I
GO:0006361 transcription initiation at RNA polymerase I promoter
GO:0006362 transcription elongation by RNA polymerase I
GO:0006363 termination of RNA polymerase I transcription
GO:0008361 regulation of cell size
GO:0042254 ribosome biogenesis
GO:0042790 nucleolar large rRNA transcription by RNA polymerase I
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005736 RNA polymerase I complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6rwe, PDBe:6rwe, PDBj:6rwe
PDBsum6rwe
PubMed31804486
UniProtQ01080|RPA49_YEAST DNA-directed RNA polymerase I subunit RPA49 (Gene Name=RPA49)

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