Structure of PDB 6lvv Chain M

Receptor sequence
>6lvvM (length=762) Species: 1130061 (Paracoccus sp. SSG05) [Search protein sequence]
MKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAG
PGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFL
WSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSD
RPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVS
ADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALG
QDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGYGHHGRC
MNQPSRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTV
PEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYA
NEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTYDGHIDGRGVQ
YTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDL
NDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMY
WIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARAT
QKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVG
GGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNG
GEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVL
NQFIKDEPAPRV
3D structure
PDB6lvv A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
ChainM
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.1.56: N,N-dimethylformamidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE M Y399 Y440 E521 Y399 Y440 E521
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
GO:0050116 N,N-dimethylformamidase activity

View graph for
Molecular Function
External links
PDB RCSB:6lvv, PDBe:6lvv, PDBj:6lvv
PDBsum6lvv
PubMed32452120
UniProtI6NT79

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