Structure of PDB 6db7 Chain M

Receptor sequence

>6db7M (length=210) Species: 9606 (Homo sapiens) [Search protein sequence]

YELTQPPSVSVSPGQTARITCSGDALPKEYAYWYQQKSGQAPVLVIYEDT
RRPSGIPERFSGSSSGTMATLTVSGAHVDDEADYYCYSRDTSANQWVFGG
GTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWK
ADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEG
STVEKTVAPT

3D structure

PDB

6db7 Structural Comparison of Human Anti-HIV-1 gp120 V3 Monoclonal Antibodies of the Same Gene Usage Induced by Vaccination and Chronic Infection.

Chain

Resolution

2.213 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	M	K30 E31 Y32 D51 R91	K28 E29 Y30 D49 R89

External links

PDB	RCSB:6db7, PDBe:6db7, PDBj:6db7
PDBsum	6db7
PubMed	29997214

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