Structure of PDB 5w1t Chain M

Receptor sequence
>5w1tM (length=140) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH
MQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDF
GYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG
3D structure
PDB5w1t Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA.
ChainM
Resolution4.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN M C114 C138 C103 C127
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
GO:0097216 guanosine tetraphosphate binding
Biological Process
GO:0006302 double-strand break repair
GO:0010468 regulation of gene expression
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5w1t, PDBe:5w1t, PDBj:5w1t
PDBsum5w1t
PubMed29478808
UniProtP0ABS1|DKSA_ECOLI RNA polymerase-binding transcription factor DksA (Gene Name=dksA)

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