Structure of PDB 5sva Chain M

Receptor sequence
>5svaM (length=156) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
MNVTPLDELQWKSPEWIQVFGLRTENVLDYFAESPFFDKTSNNQVIKMQR
DPARRQILFKYPMYMQLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNN
SGVGSAKGPEIIPLQDYYIIGANIYQSPTIFKIVQSRLMSTSYHLNSTLE
SLYDLI
3D structure
PDB5sva Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex.
ChainM
Resolution15.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide M E8 L9 Q10 E8 L9 Q10
Gene Ontology
Molecular Function
GO:0003712 transcription coregulator activity
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
Biological Process
GO:0006357 regulation of transcription by RNA polymerase II
GO:0032968 positive regulation of transcription elongation by RNA polymerase II
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0051123 RNA polymerase II preinitiation complex assembly
GO:0060261 positive regulation of transcription initiation by RNA polymerase II
Cellular Component
GO:0005634 nucleus
GO:0016592 mediator complex
GO:0070847 core mediator complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5sva, PDBe:5sva, PDBj:5sva
PDBsum5sva
PubMed27610567
UniProtP38782|MED6_YEAST Mediator of RNA polymerase II transcription subunit 6 (Gene Name=MED6)

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