Structure of PDB 5jbh Chain M

Receptor sequence
>5jbhM (length=133) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence]
QVNIKKKEKWGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDE
PSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRA
LARAGLKIGRVEDVTPIPHDGTRPKGGRRGRRV
3D structure
PDB5jbh Cryo-EM study of start codon selection during archaeal translation initiation.
ChainM
Resolution5.34 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna M H18 Y20 N25 H29 G35 E37 T38 G45 M46 D51 E54 P122 H123 D124 G125 R127 K129 R132 R133 R135 R136 V137 H14 Y16 N21 H25 G31 E33 T34 G41 M42 D47 E50 P118 H119 D120 G121 R123 K125 R128 R129 R131 R132 V133
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5jbh, PDBe:5jbh, PDBj:5jbh
PDBsum5jbh
PubMed27819266
UniProtQ8U0E3|RS11_PYRFU Small ribosomal subunit protein uS11 (Gene Name=rps11)

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