Structure of PDB 5d2l Chain M

Receptor sequence
>5d2lM (length=273) Species: 9606 (Homo sapiens) [Search protein sequence]
SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPW
IEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGC
DVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAH
VAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATL
RCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPS
GQEQRYTCHVQHEGLPKPLTLRW
3D structure
PDB5d2l Structural Basis for Clonal Diversity of the Public T Cell Response to a Dominant Human Cytomegalovirus Epitope.
ChainM
Resolution3.511 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide M Y7 F9 E63 K66 V67 H70 T73 D77 Y84 R97 Y99 K146 W147 Y159 W167 Y171 Y6 F8 E62 K65 V66 H69 T72 D76 Y83 R96 Y98 K145 W146 Y158 W166 Y170
External links
PDB RCSB:5d2l, PDBe:5d2l, PDBj:5d2l
PDBsum5d2l
PubMed26429912
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

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