Structure of PDB 4emz Chain M

Receptor sequence
>4emzM (length=255) Species: 10090 (Mus musculus) [Search protein sequence]
WRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMP
ELRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPP
DGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKAKSQFKRRSTAN
NVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKEYLMRA
HFGLKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDY
QLRTQ
3D structure
PDB4emz Structural basis of evasion of cellular adaptive immunity by HIV-1 Nef.
ChainM
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide M F172 D174 R225 Y384 R393 Y394 L395 K396 P407 W408 V409 R410 I412 F14 D16 R67 Y216 R225 Y226 L227 K228 P239 W240 V241 R242 I244
Gene Ontology
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0030131 clathrin adaptor complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4emz, PDBe:4emz, PDBj:4emz
PDBsum4emz
PubMed22705789
UniProtP35585|AP1M1_MOUSE AP-1 complex subunit mu-1 (Gene Name=Ap1m1)

[Back to BioLiP]