Structure of PDB 1ngm Chain M

Receptor sequence
>1ngmM (length=180) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPK
TTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNI
VGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSG
KIVLTGAKQREEIYQAFEAIYPVLSEFRKM
3D structure
PDB1ngm Crystal structure of a transcription factor IIIB core interface ternary complex
ChainM
Resolution2.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna M V71 F116 S118 K120 Q158 N159 F190 R196 T215 G216 V11 F56 S58 K60 Q98 N99 F130 R136 T155 G156
BS02 dna M Q68 N69 R98 F99 I103 R105 T112 L114 T124 G125 F207 K211 V213 Q8 N9 R38 F39 I43 R45 T52 L54 T64 G65 F147 K151 V153
Gene Ontology
Biological Process
GO:0006352 DNA-templated transcription initiation

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Molecular Function
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Biological Process
External links
PDB RCSB:1ngm, PDBe:1ngm, PDBj:1ngm
PDBsum1ngm
PubMed12660736
UniProtP13393|TBP_YEAST TATA-box-binding protein (Gene Name=SPT15)

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