Structure of PDB 8oj0 Chain Lz

Receptor sequence
>8oj0Lz (length=217) Species: 9606 (Homo sapiens) [Search protein sequence]
MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFS
GTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLV
KKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDE
VKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN
VRALYIKSTMGKPQRLY
3D structure
PDB8oj0 UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER
ChainLz
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Lz R26 K27 F28 E33 Q35 R60 K62 K98 K105 C164 A166 R202 K207 T209 M210 G211 P213 R26 K27 F28 E33 Q35 R60 K62 K98 K105 C164 A166 R202 K207 T209 M210 G211 P213
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0045471 response to ethanol
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0014069 postsynaptic density
GO:0015934 large ribosomal subunit
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8oj0, PDBe:8oj0, PDBj:8oj0
PDBsum8oj0
PubMed38383785
UniProtP62906|RL10A_HUMAN Large ribosomal subunit protein uL1 (Gene Name=RPL10A)

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