Structure of PDB 8pv4 Chain Lq

Receptor sequence

>8pv4Lq (length=139) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]

SNVSADLIWEVSRNYNSFLVKQRTGTFSRDALNLTNQHSRKHAGFVNDKA
LGIVPAEKGVKVIAKKVKAANKPASSLYTVTYKSTARKAYKAIASQAAKH
GYRADLRQAAVARASAILRSQRPVKPEPPKKLRGAAARR

3D structure

PDB

8pv4 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.

Chain

Resolution

2.9 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Lq	W10 R14 N15 Y16 S18 K22 R24 R30 H39 R41 K42 K67 Y79 Y83 K84 K92 A93 S96 H101 Y103 R104 A105 D106 R108 P129 K132 R134 G135 A136 A137	W9 R13 N14 Y15 S17 K21 R23 R29 H38 R40 K41 K66 Y78 Y82 K83 K91 A92 S95 H100 Y102 R103 A104 D105 R107 P128 K131 R133 G134 A135 A136

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit

External links