Structure of PDB 8oo0 Chain Lp

Receptor sequence
>8oo0Lp (length=91) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
SKRTKKVGISGKYGTRYGASLRKLVKKQEVTQHARYTCTFCGKNSVRRTA
VGIWSCKSCKKTMAGGAYTVSTPAAAAMRSTLRRLREITEA
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainLp
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Lp S2 R4 T5 K6 V8 G9 K13 T16 R17 Y18 G19 A20 S21 H34 R48 R49 T50 V52 S1 R3 T4 K5 V7 G8 K12 T15 R16 Y17 G18 A19 S20 H33 R47 R48 T49 V51
BS02 ZN Lp C39 C42 C57 C38 C41 C56
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0S6B0

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