Structure of PDB 8oo0 Chain Lo

Receptor sequence
>8oo0Lo (length=104) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
VNVPKTRKTFCKGKDCQKHTLHKVTQYKAGKASAFAQGKRRYDRKQSGYG
GQTKPVFHKKAKTTKKIVLRLECSVCKTKKQLPLKRCKHFELGGDKKTKG
AALV
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainLo
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Lo V2 N3 P5 R8 K9 T10 K13 H20 Y28 S34 Q38 G39 R41 R45 G49 Q53 P56 V57 F58 K60 A62 K63 T65 Q82 K98 K100 V1 N2 P4 R7 K8 T9 K12 H19 Y27 S33 Q37 G38 R40 R44 G48 Q52 P55 V56 F57 K59 A61 K62 T64 Q81 K97 K99
BS02 ZN Lo C17 C74 C16 C73
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0SBZ6

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