Structure of PDB 6z6l Chain Lo

Receptor sequence

>6z6lLo (length=103) Species: 9606 (Homo sapiens) [Search protein sequence]

VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQ
TKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG
QVI

3D structure

PDB

6z6l Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes.

Chain

Resolution

3.0 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Lo	V2 N3 P5 R8 R9 T10 F11 K13 H18 Y26 K28 G29 D31 S32 A35 Q36 G37 R39 R40 R43 K44 G47 Y48 G50 Q51 T52 K53 P54 I55 F56 R57 K59 A60 K61 T63 K65 V67 K80 R81 M82 K86 C88 K89 K97 K98 K100	V1 N2 P4 R7 R8 T9 F10 K12 H17 Y25 K27 G28 D30 S31 A34 Q35 G36 R38 R39 R42 K43 G46 Y47 G49 Q50 T51 K52 P53 I54 F55 R56 K58 A59 K60 T62 K64 V66 K79 R80 M81 K85 C87 K88 K96 K97 K99
BS02	rna	Lo	G37 Y41 P54 I55	G36 Y40 P53 I54

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome

External links