Structure of PDB 7zjx Chain Lm

Receptor sequence

>7zjxLm (length=86) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK

3D structure

PDB

7zjx Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.

Chain

Resolution

3.1 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	Lm	T2 K3 G4 T5 S6 F8 G9 K10 R11 R12 N13 K14 T15 H16 K25 Q30 G35 R43 K44 R45 K46 Y47 N48 W49 K52 R55 R56 T58 T59 Y71 G81 K85	T1 K2 G3 T4 S5 F7 G8 K9 R10 R11 N12 K13 T14 H15 K24 Q29 G34 R42 K43 R44 K45 Y46 N47 W48 K51 R54 R55 T57 T58 Y70 G80 K84
BS02	rna	Lm	R20 R21 K42 T59 G62 R63 M64 R65 H66 L67 K68 Y71 R72 F74 R75 H76 R79 E80 G81 T82 P84 K87	R19 R20 K41 T58 G61 R62 M63 R64 H65 L66 K67 Y70 R71 F73 R74 H75 R78 E79 G80 T81 P83 K86
BS03	ZN	Lm	C19 C22 C34 C37	C18 C21 C33 C36

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding
GO:0046872	metal ion binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:7zjx, PDBe:7zjx, PDBj:7zjx
PDBsum	7zjx
PubMed	35709277
UniProt	U3KPD5\|RL37_RABIT Large ribosomal subunit protein eL37 (Gene Name=RPL37)