Structure of PDB 6qzp Chain Lj

Receptor sequence

>6qzpLj (length=86) Species: 9606 (Homo sapiens)

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK

3D structure

• PDB: 6qzp Visualization of chemical modifications in the human 80S ribosome structure.
• Chain: Lj
• Resolution: 2.9 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Lj	T2 K3 G4 T5 S6 S7 F8 G9 K10 R11 R12 N13 K14 T15 H16 K25 H28 Q30 G35 K36 R43 K44 R45 K46 Y47 N48 W49 K52 A53 R55 R56 T59 Y71 R75 K85	T1 K2 G3 T4 S5 S6 F7 G8 K9 R10 R11 N12 K13 T14 H15 K24 H27 Q29 G34 K35 R42 K43 R44 K45 Y46 N47 W48 K51 A52 R54 R55 T58 Y70 R74 K84
BS02	rna	Lj	R20 R21 G23 Y39 K42 T59 G60 G62 R63 M64 R65 H66 L67 Y71 R72 F74 H76 R79 G81 T82 P84 K87	R19 R20 G22 Y38 K41 T58 G59 G61 R62 M63 R64 H65 L66 Y70 R71 F73 H75 R78 G80 T81 P83 K86
BS03	ZN	Lj	C19 C34	C18 C33

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome

External links

• PDB: RCSB:6qzp, PDBe:6qzp, PDBj:6qzp
• PDBsum: 6qzp
• PubMed: 29143818
• UniProt: P61927|RL37_HUMAN Large ribosomal subunit protein eL37 (Gene Name=RPL37)