Structure of PDB 8pv7 Chain Li

Receptor sequence
>8pv7Li (length=101) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
PVERTGLIRGLNKGHKTTRRVLKERPSRRKGAQSKRTQFVRSLIREVAGL
APYERRVIELLRNGKDKRARKFSKKKLGTFGRAKRKCEELQRIIAESRRA
H
3D structure
PDB8pv7 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
ChainLi
Resolution2.12 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Li R18 K22 G23 H24 T26 R34 P35 S36 R37 R38 K39 G40 A41 Q42 S43 K44 R45 R50 Y62 K76 K80 K83 K85 G87 F89 R91 K93 R94 R9 K13 G14 H15 T17 R25 P26 S27 R28 R29 K30 G31 A32 Q33 S34 K35 R36 R41 Y53 K67 K71 K74 K76 G78 F80 R82 K84 R85
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8pv7, PDBe:8pv7, PDBj:8pv7
PDBsum8pv7
PubMed37921038
UniProtG0SBN1

[Back to BioLiP]