Structure of PDB 8pv3 Chain Li

Receptor sequence
>8pv3Li (length=101) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
PVERTGLIRGLNKGHKTTRRVLKERPSRRKGAQSKRTQFVRSLIREVAGL
APYERRVIELLRNGKDKRARKFSKKKLGTFGRAKRKCEELQRIIAESRRA
H
3D structure
PDB8pv3 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
ChainLi
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Li K22 G23 H24 R34 P35 S36 R37 R38 K39 G40 A41 Q42 S43 K44 R45 R50 Y62 K85 G87 R91 R94 K95 K13 G14 H15 R25 P26 S27 R28 R29 K30 G31 A32 Q33 S34 K35 R36 R41 Y53 K76 G78 R82 R85 K86
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8pv3, PDBe:8pv3, PDBj:8pv3
PDBsum8pv3
PubMed37921038
UniProtG0SBN1

[Back to BioLiP]