Structure of PDB 8i9y Chain Ld

Receptor sequence
>8i9yLd (length=109) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
IADVVAREYTIHLHKRLHGVTFKKRAPRAIKEIKKFAQKAMGTSDVRLDP
QLNKKVWEQGIKGVPFRIRVRISRRRNDEEGAKEKLYSYVQAVNVKNPKG
LLTSVVEEE
3D structure
PDB8i9y Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainLd
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ld T21 H23 H25 K26 R27 H29 G30 V31 T32 F33 K34 K35 R36 K42 F47 K50 L59 P61 N64 K65 W68 Q70 I72 K73 R78 K110 L113 T114 T10 H12 H14 K15 R16 H18 G19 V20 T21 F22 K23 K24 R25 K31 F36 K39 L48 P50 N53 K54 W57 Q59 I61 K62 R67 K99 L102 T103
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9y, PDBe:8i9y, PDBj:8i9y
PDBsum8i9y
PubMed37129998
UniProtG0SD68

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