Structure of PDB 6t7t Chain Ld

Receptor sequence

>6t7tLd (length=109) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]

LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAP
ELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLVASAKG
LQTVVVEED

3D structure

PDB

6t7t Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.

Chain

Resolution

3.1 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ld	R10 I14 N15 H17 K18 R19 H21 G22 V23 S24 F25 K26 K27 R28 R31 K34 F39 H43 L51 N56 Q57 W60 R62 V64 K65 Y69 R70 K102 G103 L104 Q105 T106	R7 I11 N12 H14 K15 R16 H18 G19 V20 S21 F22 K23 K24 R25 R28 K31 F36 H40 L48 N53 Q54 W57 R59 V61 K62 Y66 R67 K99 G100 L101 Q102 T103

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation
GO:0006450	regulation of translational fidelity

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:6t7t, PDBe:6t7t, PDBj:6t7t
PDBsum	6t7t
PubMed	31858614
UniProt	P0C2H8\|RL31A_YEAST Large ribosomal subunit protein eL31A (Gene Name=RPL31A)