Structure of PDB 8pvl Chain LZ

Receptor sequence
>8pvlLZ (length=135) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
MKFLKTSRVCLVTRGRYAGKKVVIIQPVDQGTKSHPYGHALVAGIERYPS
KITRRMSKARIEKRSKIKPFIKVINYNHLMPTRYTLELEGLKAVINADTF
KEPSQREEAKKTVKKVLEDRYNSGKNRWFFTPLRF
3D structure
PDB8pvl Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
ChainLZ
Resolution2.19 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LZ R14 G15 R16 H35 Y37 R47 T53 R54 R55 K63 R64 K68 K72 V73 N75 N77 H78 R106 K110 K111 K114 R134 F135 R14 G15 R16 H35 Y37 R47 T53 R54 R55 K63 R64 K68 K72 V73 N75 N77 H78 R106 K110 K111 K114 R134 F135
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8pvl, PDBe:8pvl, PDBj:8pvl
PDBsum8pvl
PubMed37921038
UniProtG0RZE9

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