Structure of PDB 9fq0 Chain LY

Receptor sequence

>9fq0LY (length=129) Species: 9606 (Homo sapiens)

MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIR
KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIH
PSKVVITRLKLDKDRKKILERKAKSRQVG

3D structure

• PDB: 9fq0 Multi-protein assemblies orchestrate enzymatic processing of the nascent chain on the 80S ribosome
• Chain: LY
• Resolution: 4.67 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	LY	S23 H24 R27 R50 K51 Q72 Y74 R75 K76 K113 D114	S23 H24 R27 R50 K51 Q72 Y74 R75 K76 K113 D114
BS02	rna	LY	M1 K2 S9 R11 N14 H18 K28 I29 S31 P33 K36 R39 R45 S46 R59 G60 H61 K63 K77 R87 K89 A90 N91 H100 S102 K103 R121 K122 S125 R126	M1 K2 S9 R11 N14 H18 K28 I29 S31 P33 K36 R39 R45 S46 R59 G60 H61 K63 K77 R87 K89 A90 N91 H100 S102 K103 R121 K122 S125 R126

External links

• PDB: RCSB:9fq0, PDBe:9fq0, PDBj:9fq0
• PDBsum: 9fq0
• UniProt: Q6IBH6