Structure of PDB 8onz Chain LY

Receptor sequence
>8onzLY (length=134) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
MKVRPTVSSSRRKARKAHFSAPSSVRRVIMSAPLSKELREKYNVRSIPIR
KGDEVQIVRGAHKDKEGKVTSVYRLKYVIHVERVTREKATGQTVPIGIHP
SNVVITKLHLDKDRENILARIKAGREQVAKAKGK
3D structure
PDB8onz Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainLY
Resolution2.94 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LY K76 R86 K88 A89 T90 K76 R86 K88 A89 T90
BS02 rna LY P22 S23 S24 R27 R50 K51 V72 Y73 L75 D111 K112 D113 I117 P22 S23 S24 R27 R50 K51 V72 Y73 L75 D111 K112 D113 I117
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8onz, PDBe:8onz, PDBj:8onz
PDBsum8onz
PubMed38267453
UniProtG0RYN9

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