Structure of PDB 6qzp Chain LX

Receptor sequence

>6qzpLX (length=120) Species: 9606 (Homo sapiens) [Search protein sequence]

KKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESA
MKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKA
YVRLAPDYDALDVANKIGII

3D structure

PDB

6qzp Visualization of chemical modifications in the human 80S ribosome structure.

Chain

Resolution

2.9 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	LX	K37 K38 P44 T45 F46 R47 R48 K50 T51 R53 R56 Q57 P58 K59 Y60 R62 T83 E84 S85 K89 N93 N105 K106 H107 K123 N125 T126 I128 P130 K134 K135 Y137 R139	K1 K2 P8 T9 F10 R11 R12 K14 T15 R17 R20 Q21 P22 K23 Y24 R26 T47 E48 S49 K53 N57 N69 K70 H71 K87 N89 T90 I92 P94 K98 K99 Y101 R103
BS02	rna	LX	T51 L52 R56 P66 R67 R68 N69 K70 N105 H107 Q108	T15 L16 R20 P30 R31 R32 N33 K34 N69 H71 Q72

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome

External links

PDB	RCSB:6qzp, PDBe:6qzp, PDBj:6qzp
PDBsum	6qzp
PubMed	29143818
UniProt	P62750\|RL23A_HUMAN Large ribosomal subunit protein uL23 (Gene Name=RPL23A)