Structure of PDB 8oo0 Chain LW

Receptor sequence
>8oo0LW (length=133) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
MRTYEDTFSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIA
WTVLYRRQHRKGISEEVAKKRTRRTIKSQRAIVGASLEVIKERRSMRPEA
RNAARLAAIKESKEKKAAAQAAKKAEKAKNAAA
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainLW
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LW G16 K35 I49 W51 R56 K61 G16 K35 I49 W51 R56 K61
BS02 rna LW K69 K70 R73 R74 R80 I109 S112 K113 K116 K69 K70 R73 R74 R80 I109 S112 K113 K116
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
Cellular Component
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG2Q623

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