Structure of PDB 7suk Chain LW

Receptor sequence

>7sukLW (length=438) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]

QTKDKKLRAGLKKIDEQYKKAVSSAAATDYLLPESNGYLEPENELEKTFK
VQQSEIKSSVDVSTANKALDLSLKEFGPYHIKYAKNGTHLLITGRKGHVA
SMDWRKGQLRAELFLNETCHSATYLQNEQYFAVAQKKYTFIYDHEGTELH
RLKQHIEARHLDFLPYHYLLVTAGETGWLKYHDVSTGQLVSELRTKAGPT
MAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRS
GYYMATTGADRSMKIWDIRNFKQLHSVESLPTPGTNVSISDTGLLALSRG
PHVTLWKDALKLSGDSKPCFGSMGGNPHRNTPYMSHLFAGNKVENLGFVP
FEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKKQRQEQEVRTLLN
KLPADTITLDPNSIGSVDKRSSTIRLNAKDLAQTTMDA

3D structure

PDB

7suk Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome.

Chain

Resolution

3.99 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	LW	E79 K82 F84 Q143 R145 Q164 K172 H179 K188 I191 E192 T211 W213 K215 L224 E227 K231 A232 G233 N253 P264 L271 R274 P316 R334 P336 H337 C354 F355 G356 S357 M358 G359 G360 R364 A374 K422	E44 K47 F49 Q108 R110 Q129 K137 H144 K153 I156 E157 T176 W178 K180 L189 E192 K196 A197 G198 N218 P229 L236 R239 P281 R299 P301 H302 C319 F320 G321 S322 M323 G324 G325 R329 A339 K387
BS02	rna	LW	E180 T221 L414 K423 E427 R431	E145 T186 L379 K388 E392 R396
BS03	rna	LW	D39 K40 K41 A463 K464 A467	D4 K5 K6 A428 K429 A432

External links

PDB	RCSB:7suk, PDBe:7suk, PDBj:7suk
PDBsum	7suk
PubMed	35650250
UniProt	P40055\|UTP7_YEAST U3 small nucleolar RNA-associated protein 7 (Gene Name=UTP7)

[Back to BioLiP]