Structure of PDB 8i9z Chain LV

Receptor sequence
>8i9zLV (length=135) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
KRGAPGGKLKMTLGLPVGAIMNCADNSGARNLYIIAVKGAGARLNRLPAG
GVGDMVMATVKKGKPELRKKVHPAVIVRQAKPWKRFDGVFLYFEDNAGVI
VNPKGEMKGSAITGPVGKEAAELWPRIASNAGVVM
3D structure
PDB8i9z Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainLV
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LV R6 K12 L13 K14 T16 G18 P20 V21 G22 A23 I24 K42 G43 R47 N49 R50 K85 K88 F94 R2 K8 L9 K10 T12 G14 P16 V17 G18 A19 I20 K38 G39 R43 N45 R46 K81 K84 F90
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9z, PDBe:8i9z, PDBj:8i9z
PDBsum8i9z
PubMed37129998
UniProtG0SI44

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