Structure of PDB 8i9y Chain LV

Receptor sequence
>8i9yLV (length=135) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
KRGAPGGKLKMTLGLPVGAIMNCADNSGARNLYIIAVKGAGARLNRLPAG
GVGDMVMATVKKGKPELRKKVHPAVIVRQAKPWKRFDGVFLYFEDNAGVI
VNPKGEMKGSAITGPVGKEAAELWPRIASNAGVVM
3D structure
PDB8i9y Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainLV
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LV R6 G10 G11 K12 K14 T16 K42 G43 A46 R47 L48 R50 K85 F94 R2 G6 G7 K8 K10 T12 K38 G39 A42 R43 L44 R46 K81 F90
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9y, PDBe:8i9y, PDBj:8i9y
PDBsum8i9y
PubMed37129998
UniProtG0SI44

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